STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFF94215.1Integral membrane protein. (254 aa)    
Predicted Functional Partners:
EFF92781.1
Membrane protein.
  
     0.713
EFF92036.1
Membrane protein.
  
     0.698
EFF91198.1
M6 family metalloprotease domain-containing protein.
  
     0.697
EFF92058.1
Conserved hypothetical protein.
  
     0.688
EFF91616.1
PAS fold protein.
  
     0.670
EFF90995.1
Membrane protein.
  
     0.667
EFF92376.1
Conserved hypothetical protein.
  
     0.660
EFF93507.1
Secreted protein.
  
     0.627
EFF91051.1
Conserved hypothetical protein.
  
     0.619
EFF91826.1
Membrane protein; Overlaps another CDS with the same product name.
  
     0.619
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.