STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFF94246.1LacI-family transcriptional regulator. (234 aa)    
Predicted Functional Partners:
EFF90475.1
Glutamate synthase large subunit.
    
 
 0.868
EFF94275.1
Non-ribosomal peptide synthetase MxaA; Overlaps another CDS with the same product name.
    
 
 0.855
EFF93553.1
HPr family phosphocarrier.
 
 
 
 0.851
EFF89276.1
Non-ribosomal peptide synthetase.
    
 
 0.833
EFF88806.1
Non-ribosomal peptide synthetase.
    
   0.832
EFF89271.1
Non-ribosomal peptide synthetase.
    
   0.832
EFF89286.1
Phosphopantetheine attachment site.
    
   0.832
EFF91795.1
LacI-family regulatory protein.
  
     0.769
EFF91183.1
LacI family transcriptional regulator.
  
     0.768
EFF92628.1
LacI family transcription regulator.
  
     0.768
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.