Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFF90103.1 | EFF94300.1 | SSTG_00421 | SSTG_04620 | ArgJ family protein; Unextendable partial coding region. | Acetyl-lysine deacetylase. | 0.910 |
EFF90103.1 | EFF94301.1 | SSTG_00421 | SSTG_04621 | ArgJ family protein; Unextendable partial coding region. | Acetylglutamate kinase. | 0.994 |
EFF90103.1 | argB | SSTG_00421 | SSTG_00420 | ArgJ family protein; Unextendable partial coding region. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.999 |
EFF90103.1 | argC | SSTG_00421 | SSTG_00422 | ArgJ family protein; Unextendable partial coding region. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.999 |
EFF90103.1 | argC-2 | SSTG_00421 | SSTG_04622 | ArgJ family protein; Unextendable partial coding region. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.986 |
EFF90103.1 | argD | SSTG_00421 | SSTG_00419 | ArgJ family protein; Unextendable partial coding region. | Acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.999 |
EFF90103.1 | argG | SSTG_00421 | SSTG_05251 | ArgJ family protein; Unextendable partial coding region. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.977 |
EFF90103.1 | argH | SSTG_00421 | SSTG_00409 | ArgJ family protein; Unextendable partial coding region. | Argininosuccinate lyase. | 0.991 |
EFF90103.1 | argR | SSTG_00421 | SSTG_00418 | ArgJ family protein; Unextendable partial coding region. | Arginine repressor; Regulates arginine biosynthesis genes. | 0.997 |
EFF94300.1 | EFF90103.1 | SSTG_04620 | SSTG_00421 | Acetyl-lysine deacetylase. | ArgJ family protein; Unextendable partial coding region. | 0.910 |
EFF94300.1 | EFF94301.1 | SSTG_04620 | SSTG_04621 | Acetyl-lysine deacetylase. | Acetylglutamate kinase. | 0.977 |
EFF94300.1 | EFF94303.1 | SSTG_04620 | SSTG_04623 | Acetyl-lysine deacetylase. | Lysine biosynthesis enzyme LysX; Belongs to the RimK family. | 0.886 |
EFF94300.1 | argB | SSTG_04620 | SSTG_00420 | Acetyl-lysine deacetylase. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.920 |
EFF94300.1 | argC | SSTG_04620 | SSTG_00422 | Acetyl-lysine deacetylase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.942 |
EFF94300.1 | argC-2 | SSTG_04620 | SSTG_04622 | Acetyl-lysine deacetylase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.981 |
EFF94300.1 | argD | SSTG_04620 | SSTG_00419 | Acetyl-lysine deacetylase. | Acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.915 |
EFF94300.1 | argG | SSTG_04620 | SSTG_05251 | Acetyl-lysine deacetylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.936 |
EFF94301.1 | EFF90103.1 | SSTG_04621 | SSTG_00421 | Acetylglutamate kinase. | ArgJ family protein; Unextendable partial coding region. | 0.994 |
EFF94301.1 | EFF94300.1 | SSTG_04621 | SSTG_04620 | Acetylglutamate kinase. | Acetyl-lysine deacetylase. | 0.977 |
EFF94301.1 | EFF94303.1 | SSTG_04621 | SSTG_04623 | Acetylglutamate kinase. | Lysine biosynthesis enzyme LysX; Belongs to the RimK family. | 0.962 |
page 1 of 5