Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFF88402.1 | EFF90475.1 | SSTG_06051 | SSTG_00793 | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Glutamate synthase large subunit. | 0.905 |
EFF88402.1 | EFF93674.1 | SSTG_06051 | SSTG_03993 | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Conserved hypothetical protein. | 0.741 |
EFF88402.1 | EFF94303.1 | SSTG_06051 | SSTG_04623 | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Lysine biosynthesis enzyme LysX; Belongs to the RimK family. | 0.741 |
EFF90475.1 | EFF88402.1 | SSTG_00793 | SSTG_06051 | Glutamate synthase large subunit. | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.905 |
EFF90475.1 | EFF93039.1 | SSTG_00793 | SSTG_03358 | Glutamate synthase large subunit. | Oxoglutarate dehydrogenase. | 0.984 |
EFF90475.1 | EFF93674.1 | SSTG_00793 | SSTG_03993 | Glutamate synthase large subunit. | Conserved hypothetical protein. | 0.797 |
EFF90475.1 | EFF94301.1 | SSTG_00793 | SSTG_04621 | Glutamate synthase large subunit. | Acetylglutamate kinase. | 0.685 |
EFF90475.1 | EFF94303.1 | SSTG_00793 | SSTG_04623 | Glutamate synthase large subunit. | Lysine biosynthesis enzyme LysX; Belongs to the RimK family. | 0.797 |
EFF90475.1 | argB | SSTG_00793 | SSTG_00420 | Glutamate synthase large subunit. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.685 |
EFF90475.1 | argC-2 | SSTG_00793 | SSTG_04622 | Glutamate synthase large subunit. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.471 |
EFF92965.1 | EFF93674.1 | SSTG_03284 | SSTG_03993 | Glutaredoxin-like protein. | Conserved hypothetical protein. | 0.425 |
EFF92965.1 | EFF94303.1 | SSTG_03284 | SSTG_04623 | Glutaredoxin-like protein. | Lysine biosynthesis enzyme LysX; Belongs to the RimK family. | 0.425 |
EFF93039.1 | EFF90475.1 | SSTG_03358 | SSTG_00793 | Oxoglutarate dehydrogenase. | Glutamate synthase large subunit. | 0.984 |
EFF93039.1 | EFF93674.1 | SSTG_03358 | SSTG_03993 | Oxoglutarate dehydrogenase. | Conserved hypothetical protein. | 0.440 |
EFF93039.1 | EFF94303.1 | SSTG_03358 | SSTG_04623 | Oxoglutarate dehydrogenase. | Lysine biosynthesis enzyme LysX; Belongs to the RimK family. | 0.440 |
EFF93674.1 | EFF88402.1 | SSTG_03993 | SSTG_06051 | Conserved hypothetical protein. | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.741 |
EFF93674.1 | EFF90475.1 | SSTG_03993 | SSTG_00793 | Conserved hypothetical protein. | Glutamate synthase large subunit. | 0.797 |
EFF93674.1 | EFF92965.1 | SSTG_03993 | SSTG_03284 | Conserved hypothetical protein. | Glutaredoxin-like protein. | 0.425 |
EFF93674.1 | EFF93039.1 | SSTG_03993 | SSTG_03358 | Conserved hypothetical protein. | Oxoglutarate dehydrogenase. | 0.440 |
EFF93674.1 | EFF94300.1 | SSTG_03993 | SSTG_04620 | Conserved hypothetical protein. | Acetyl-lysine deacetylase. | 0.447 |
page 1 of 4