Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFF88334.1 | EFF94315.1 | SSTG_05983 | SSTG_04635 | MmcJ protein. | DoxX family protein. | 0.436 |
EFF93716.1 | EFF94315.1 | SSTG_04035 | SSTG_04635 | AP endonuclease, family 2. | DoxX family protein. | 0.540 |
EFF94314.1 | EFF94315.1 | SSTG_04634 | SSTG_04635 | 5-carboxymethyl-2-hydroxymuconate delta isomerase. | DoxX family protein. | 0.437 |
EFF94315.1 | EFF88334.1 | SSTG_04635 | SSTG_05983 | DoxX family protein. | MmcJ protein. | 0.436 |
EFF94315.1 | EFF93716.1 | SSTG_04635 | SSTG_04035 | DoxX family protein. | AP endonuclease, family 2. | 0.540 |
EFF94315.1 | EFF94314.1 | SSTG_04635 | SSTG_04634 | DoxX family protein. | 5-carboxymethyl-2-hydroxymuconate delta isomerase. | 0.437 |
EFF94315.1 | EFF94316.1 | SSTG_04635 | SSTG_04636 | DoxX family protein. | Pyridoxamine 5-phosphate oxidase, FMN-binding protein. | 0.486 |
EFF94316.1 | EFF94315.1 | SSTG_04636 | SSTG_04635 | Pyridoxamine 5-phosphate oxidase, FMN-binding protein. | DoxX family protein. | 0.486 |