STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFF89443.1Endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family. (380 aa)    
Predicted Functional Partners:
EFF88467.1
Cellulose binding protein.
 
     0.787
EFF88689.1
Glycosyl hydrolase.
 
  0.757
EFF93651.1
Endo-1,4-beta-xylanase B; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
  
  0.751
EFF93383.1
Hydrolytic protein.
 
  
  0.697
EFF88417.1
Unextendable partial coding region.
   
 0.685
EFF89471.1
Chitinase.
 
  
  0.682
EFF92563.1
Secreted protein.
  
 
  0.674
EFF93700.1
Chitinase; Truncated CDS.
    
0.655
EFF92791.1
dTMP kinase.
   
  0.632
EFF92794.1
Conserved hypothetical protein.
   
  0.632
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.