STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFF89532.1Translation initiation factor IF-2. (246 aa)    
Predicted Functional Partners:
EFF90355.1
Cobaltochelatase subunit.
  
 0.852
EFF93186.1
ATP/GTP binding protein.
   
   0.846
EFF93660.1
Protein serine-threonine phosphatase; Truncated CDS.
   
   0.846
EFF94230.1
Conserved hypothetical protein.
   
   0.846
EFF88863.1
Conserved hypothetical protein.
   
   0.846
EFF89356.1
Conserved hypothetical protein.
   
   0.846
EFF89536.1
Peptidase family M20/M25/M40.
 
     0.756
EFF89533.1
Conserved hypothetical protein.
 
     0.733
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
  0.722
EFF89545.1
FAD dependent oxidoreductase.
 
   
 0.696
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
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