STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFF88639.1Cse2 family CRISPR-associated protein. (205 aa)    
Predicted Functional Partners:
EFF88638.1
Conserved hypothetical protein.
  
 
 0.999
EFF88640.1
Cse4 family CRISPR-associated protein.
 
 
 0.999
EFF88641.1
CRISPR-associated protein cas5, subtype.
 
 
 0.999
EFF88642.1
Cse3 family CRISPR-associated protein.
 
 
 0.999
cas1
CRISPR-associated protein cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
  
 0.963
EFF88644.1
CRISPR-associated protein cas2.
 
   
 0.961
EFF88637.1
CRISPR-associated helicase cas3, core.
 
  
 0.925
EFF88645.1
Conserved hypothetical protein.
 
     0.739
EFF94278.1
Mucin-2.
  
     0.563
EFF89296.1
FAD dependent oxidoreductase.
  
     0.493
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.