Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFF88474.1 | EFF88733.1 | SSTG_05869 | SSTG_05740 | orn/DAP/Arg decarboxylase, family 2. | Saccharopine dehydrogenase. | 0.922 |
EFF88474.1 | EFF89996.1 | SSTG_05869 | SSTG_00314 | orn/DAP/Arg decarboxylase, family 2. | Lysine monooxygenase. | 0.911 |
EFF88474.1 | lysA | SSTG_05869 | SSTG_05676 | orn/DAP/Arg decarboxylase, family 2. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.930 |
EFF88733.1 | EFF88474.1 | SSTG_05740 | SSTG_05869 | Saccharopine dehydrogenase. | orn/DAP/Arg decarboxylase, family 2. | 0.922 |
EFF88733.1 | EFF88806.1 | SSTG_05740 | SSTG_04676 | Saccharopine dehydrogenase. | Non-ribosomal peptide synthetase. | 0.715 |
EFF88733.1 | EFF89271.1 | SSTG_05740 | SSTG_05141 | Saccharopine dehydrogenase. | Non-ribosomal peptide synthetase. | 0.715 |
EFF88733.1 | EFF89276.1 | SSTG_05740 | SSTG_05146 | Saccharopine dehydrogenase. | Non-ribosomal peptide synthetase. | 0.877 |
EFF88733.1 | EFF89282.1 | SSTG_05740 | SSTG_05152 | Saccharopine dehydrogenase. | Non-ribosomal peptide synthetase. | 0.859 |
EFF88733.1 | EFF89996.1 | SSTG_05740 | SSTG_00314 | Saccharopine dehydrogenase. | Lysine monooxygenase. | 0.904 |
EFF88733.1 | EFF90728.1 | SSTG_05740 | SSTG_01046 | Saccharopine dehydrogenase. | Hypothetical protein. | 0.810 |
EFF88733.1 | EFF94275.1 | SSTG_05740 | SSTG_04595 | Saccharopine dehydrogenase. | Non-ribosomal peptide synthetase MxaA; Overlaps another CDS with the same product name. | 0.898 |
EFF88733.1 | folE | SSTG_05740 | SSTG_02629 | Saccharopine dehydrogenase. | GTP cyclohydrolase I. | 0.719 |
EFF88733.1 | lysA | SSTG_05740 | SSTG_05676 | Saccharopine dehydrogenase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.922 |
EFF88806.1 | EFF88733.1 | SSTG_04676 | SSTG_05740 | Non-ribosomal peptide synthetase. | Saccharopine dehydrogenase. | 0.715 |
EFF88806.1 | EFF89271.1 | SSTG_04676 | SSTG_05141 | Non-ribosomal peptide synthetase. | Non-ribosomal peptide synthetase. | 0.999 |
EFF88806.1 | EFF89276.1 | SSTG_04676 | SSTG_05146 | Non-ribosomal peptide synthetase. | Non-ribosomal peptide synthetase. | 0.999 |
EFF88806.1 | EFF89282.1 | SSTG_04676 | SSTG_05152 | Non-ribosomal peptide synthetase. | Non-ribosomal peptide synthetase. | 0.999 |
EFF88806.1 | EFF94275.1 | SSTG_04676 | SSTG_04595 | Non-ribosomal peptide synthetase. | Non-ribosomal peptide synthetase MxaA; Overlaps another CDS with the same product name. | 0.999 |
EFF89271.1 | EFF88733.1 | SSTG_05141 | SSTG_05740 | Non-ribosomal peptide synthetase. | Saccharopine dehydrogenase. | 0.715 |
EFF89271.1 | EFF88806.1 | SSTG_05141 | SSTG_04676 | Non-ribosomal peptide synthetase. | Non-ribosomal peptide synthetase. | 0.999 |
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