STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFF88790.1Transposase. (394 aa)    
Predicted Functional Partners:
EFF94342.1
Membrane protein.
  
  
 0.882
EFF91195.1
Conserved hypothetical protein.
  
    0.856
EFF94169.1
Conserved hypothetical protein.
   
    0.775
EFF91745.1
Transposase; Unextendable partial coding region.
  
     0.678
EFF88789.1
Hypothetical protein.
       0.555
EFF91746.1
Conserved hypothetical protein; Truncated CDS.
  
     0.543
EFF91751.1
Transposase.
  
     0.517
EFF88788.1
PE-PGRS family protein.
       0.400
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.