STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFF88275.1Isomerase. (127 aa)    
Predicted Functional Partners:
EFF93908.1
methylmalonyl-CoA mutase.
    
 0.808
EFF93966.1
Xre family toxin-antitoxin system, antitoxin component.
 
     0.794
EFF93629.1
long-chain-fatty-acid-CoA ligase.
  
 0.782
EFF88274.1
Conserved hypothetical protein.
       0.748
EFF92510.1
Ferredoxin oxidoreductase, alpha subunit.
     
 0.722
EFF93233.1
Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.667
EFF89503.1
methylmalonyl-CoA mutase, alpha subunit.
    
 0.626
EFF94120.1
Polyketide synthase type I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.558
EFF94126.1
Modular polyketide synthase.
  
 0.558
EFF88456.1
Conserved hypothetical protein.
 
     0.544
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.