Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANU06783.1 | ctaA | A6F65_00458 | A6F65_00460 | Hypothetical protein. | Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.638 |
ANU06783.1 | cutA | A6F65_00458 | A6F65_00459 | Hypothetical protein. | Divalent-cation tolerance protein CutA. | 0.784 |
ANU06783.1 | thiG | A6F65_00458 | A6F65_00462 | Hypothetical protein. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.527 |
ANU07177.1 | ANU07416.1 | A6F65_00860 | A6F65_01108 | SCO1/SenC. | SURF1 family protein. | 0.472 |
ANU07177.1 | ctaA | A6F65_00860 | A6F65_00460 | SCO1/SenC. | Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.703 |
ANU07177.1 | ctaB | A6F65_00860 | A6F65_01104 | SCO1/SenC. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.551 |
ANU07177.1 | ctaC | A6F65_00860 | A6F65_01102 | SCO1/SenC. | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.858 |
ANU07177.1 | ctaD | A6F65_00860 | A6F65_01103 | SCO1/SenC. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.423 |
ANU07177.1 | ctaG | A6F65_00860 | A6F65_01106 | SCO1/SenC. | Cytochrome c oxidase assembly protein CtaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | 0.783 |
ANU07416.1 | ANU07177.1 | A6F65_01108 | A6F65_00860 | SURF1 family protein. | SCO1/SenC. | 0.472 |
ANU07416.1 | ctaA | A6F65_01108 | A6F65_00460 | SURF1 family protein. | Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.776 |
ANU07416.1 | ctaB | A6F65_01108 | A6F65_01104 | SURF1 family protein. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.750 |
ANU07416.1 | ctaC | A6F65_01108 | A6F65_01102 | SURF1 family protein. | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.551 |
ANU07416.1 | ctaD | A6F65_01108 | A6F65_01103 | SURF1 family protein. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.604 |
ANU07416.1 | ctaE | A6F65_01108 | A6F65_01107 | SURF1 family protein. | Cytochrome c oxidase subunit 3. | 0.659 |
ANU07416.1 | ctaG | A6F65_01108 | A6F65_01106 | SURF1 family protein. | Cytochrome c oxidase assembly protein CtaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | 0.843 |
ctaA | ANU06783.1 | A6F65_00460 | A6F65_00458 | Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | Hypothetical protein. | 0.638 |
ctaA | ANU07177.1 | A6F65_00460 | A6F65_00860 | Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | SCO1/SenC. | 0.703 |
ctaA | ANU07416.1 | A6F65_00460 | A6F65_01108 | Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | SURF1 family protein. | 0.776 |
ctaA | ctaB | A6F65_00460 | A6F65_01104 | Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.987 |
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