STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANU07212.1Peptidase inhibitor I78 family protein. (98 aa)    
Predicted Functional Partners:
ANU07741.1
Dicarboxylate transport.
  
     0.563
paaZ_2
Bifunctional protein PaaZ.
       0.557
ANU07183.1
Putative sulfite oxidase subunit YedZ.
  
     0.447
ANU07214.1
Entericidin B membrane lipoprotein.
       0.435
ANU06426.1
NADH-dependent formate dehydrogenase delta subunit FdsD.
  
     0.432
Your Current Organism:
Altererythrobacter namhicola
NCBI taxonomy Id: 645517
Other names: A. namhicola, Altererythrobacter namhicola Park et al. 2011, JCM 16345, KCTC 22736, alpha proteobacterium KYW48, strain KYW48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.