Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANU07287.1 | dapD | A6F65_00977 | A6F65_00976 | Hypothetical protein. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. | 0.435 |
ANU07287.1 | epr | A6F65_00977 | A6F65_00978 | Hypothetical protein. | Minor extracellular protease Epr precursor; Belongs to the peptidase S8 family. | 0.773 |
dapD | ANU07287.1 | A6F65_00976 | A6F65_00977 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. | Hypothetical protein. | 0.435 |
dapD | epr | A6F65_00976 | A6F65_00978 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. | Minor extracellular protease Epr precursor; Belongs to the peptidase S8 family. | 0.461 |
epr | ANU07287.1 | A6F65_00978 | A6F65_00977 | Minor extracellular protease Epr precursor; Belongs to the peptidase S8 family. | Hypothetical protein. | 0.773 |
epr | dapD | A6F65_00978 | A6F65_00976 | Minor extracellular protease Epr precursor; Belongs to the peptidase S8 family. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. | 0.461 |