STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANU08338.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
ANU08339.1
Hypothetical protein.
       0.773
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
       0.555
ANU08337.1
Hypothetical protein.
       0.536
ycgJ
Putative methyltransferase YcgJ.
       0.471
metF
5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
       0.471
metH_2
Methionine synthase.
       0.471
cobT
Aerobic cobaltochelatase subunit CobT.
       0.437
metH_3
Methionine synthase.
       0.429
Your Current Organism:
Altererythrobacter namhicola
NCBI taxonomy Id: 645517
Other names: A. namhicola, Altererythrobacter namhicola Park et al. 2011, JCM 16345, KCTC 22736, alpha proteobacterium KYW48, strain KYW48
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