STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cadAPutative cadmium-transporting ATPase. (661 aa)    
Predicted Functional Partners:
czcC
Cobalt-zinc-cadmium resistance protein CzcC precursor.
 
  
 0.867
cnrA
Nickel and cobalt resistance protein CnrA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.855
cnrB
Nickel and cobalt resistance protein CnrB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.854
ycgJ
Putative methyltransferase YcgJ.
  
  
 0.571
czcD
Cadmium, cobalt and zinc/H(+)-K(+) antiporter.
  
  
 0.500
korA
2-oxoglutarate oxidoreductase subunit KorA.
     
 0.486
trxB_2
Thioredoxin reductase.
  
  
 0.461
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
  
 0.459
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
   
 0.444
fieF
Ferrous-iron efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
 0.431
Your Current Organism:
Altererythrobacter namhicola
NCBI taxonomy Id: 645517
Other names: A. namhicola, Altererythrobacter namhicola Park et al. 2011, JCM 16345, KCTC 22736, alpha proteobacterium KYW48, strain KYW48
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