STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2G6F5Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (177 aa)    
Predicted Functional Partners:
A0A1Y2G879
Uncharacterized protein.
    
 0.999
A0A1Y2G9E3
BET3 family protein.
   
 0.999
A0A1Y2GM43
Uncharacterized protein.
    
 0.999
A0A1Y2GNY3
Sedlin, N-terminal conserved region-domain-containing protein.
    
 0.999
A0A1Y2GPS1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
A0A1Y2GS85
Trafficking protein particle complex subunit BET3.
   
 0.999
A0A1Y2GTP0
Sedlin.
   
 0.999
A0A1Y2H3I7
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
   
 0.999
A0A1Y2GAD9
TRAPP II complex.
   
 0.998
A0A1Y2GSS0
Gryzun, putative trafficking through golgi-domain-containing protein.
    
 0.998
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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