STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2G9J9Uncharacterized protein. (263 aa)    
Predicted Functional Partners:
A0A1Y2GUM1
Uncharacterized protein.
   
 0.912
A0A1Y2GRX8
Kinase-like domain-containing protein.
   
 0.726
A0A1Y2GKJ0
Uncharacterized protein.
    
 0.724
A0A1Y2GHH9
ANK_REP_REGION domain-containing protein.
   
 0.690
A0A1Y2GI30
ANK_REP_REGION domain-containing protein.
   
 0.690
A0A1Y2GK20
Uncharacterized protein.
   
 0.651
A0A1Y2GKT6
Uncharacterized protein.
    
 0.623
A0A1Y2GTF5
Uncharacterized protein.
    
 0.622
A0A1Y2GPB5
MRG-domain-containing protein.
    
 0.501
A0A1Y2GY02
Ubiquitin-related domain-containing protein.
    
 0.501
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.