A0A1Y2GAI5 protein (Lobosporangium transversale)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1Y2GAI5

Uncharacterized protein. (3132 aa)

Predicted Functional Partners:

A0A1Y2GHM6

0.876

A0A1Y2GMU1

0.876

A0A1Y2GP54

0.876

A0A1Y2GYC8

0.876

A0A1Y2GHP2

0.869

A0A1Y2GM71

0.869

A0A1Y2GAC3

0.862

A0A1Y2GZF9

0.841

A0A1Y2H186

0.841

A0A1Y2G743

0.840

Your Current Organism:

Lobosporangium transversale

NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y2G743	A0A1Y2GAC3	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	JmjC domain, hydroxylase-domain-containing protein.	0.516
A0A1Y2G743	A0A1Y2GAI5	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.840
A0A1Y2G743	A0A1Y2GHM6	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Kinase-like domain-containing protein.	0.891
A0A1Y2G743	A0A1Y2GMU1	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Non-specific serine/threonine protein kinase.	0.891
A0A1Y2G743	A0A1Y2GP54	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Non-specific serine/threonine protein kinase.	0.891
A0A1Y2G743	A0A1Y2GYC8	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Kinase-like domain-containing protein.	0.891
A0A1Y2GAC3	A0A1Y2G743	JmjC domain, hydroxylase-domain-containing protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.516
A0A1Y2GAC3	A0A1Y2GAI5	JmjC domain, hydroxylase-domain-containing protein.	Uncharacterized protein.	0.862
A0A1Y2GAC3	A0A1Y2GHM6	JmjC domain, hydroxylase-domain-containing protein.	Kinase-like domain-containing protein.	0.754
A0A1Y2GAC3	A0A1Y2GMU1	JmjC domain, hydroxylase-domain-containing protein.	Non-specific serine/threonine protein kinase.	0.754
A0A1Y2GAC3	A0A1Y2GP54	JmjC domain, hydroxylase-domain-containing protein.	Non-specific serine/threonine protein kinase.	0.754
A0A1Y2GAC3	A0A1Y2GYC8	JmjC domain, hydroxylase-domain-containing protein.	Kinase-like domain-containing protein.	0.754
A0A1Y2GAI5	A0A1Y2G743	Uncharacterized protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.840
A0A1Y2GAI5	A0A1Y2GAC3	Uncharacterized protein.	JmjC domain, hydroxylase-domain-containing protein.	0.862
A0A1Y2GAI5	A0A1Y2GHM6	Uncharacterized protein.	Kinase-like domain-containing protein.	0.876
A0A1Y2GAI5	A0A1Y2GHP2	Uncharacterized protein.	MOB kinase activator-like 1-like protein A.	0.869
A0A1Y2GAI5	A0A1Y2GM71	Uncharacterized protein.	Mps1 binder-like protein.	0.869
A0A1Y2GAI5	A0A1Y2GMU1	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.876
A0A1Y2GAI5	A0A1Y2GP54	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.876
A0A1Y2GAI5	A0A1Y2GYC8	Uncharacterized protein.	Kinase-like domain-containing protein.	0.876