STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GAP6RanBD1 domain-containing protein. (625 aa)    
Predicted Functional Partners:
A0A1Y2GNX1
Uncharacterized protein.
     
 0.767
A0A1Y2H4D8
NTF2 domain-containing protein.
     
 0.722
A0A1Y2G7V7
Nuclear pore glyco protein p62.
     
 0.683
A0A1Y2GMB4
Uncharacterized protein.
     
 0.683
A0A1Y2GAR5
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
   
 
 0.659
A0A1Y2GFU6
Poly(A)+ RNA export protein.
   
 
  0.651
A0A1Y2GGP7
Putative SONA.
   
 
  0.651
A0A1Y2GL87
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
     
 0.649
A0A1Y2GCW5
Nuclear pore protein.
     
 0.643
A0A1Y2H0Q1
Nucleoporin complex subunit 54-domain-containing protein.
     
 0.628
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.