STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GB78J domain-containing protein. (369 aa)    
Predicted Functional Partners:
A0A1Y2GLG9
Pre-mRNA splicing factor component-domain-containing protein.
    
 
 0.977
A0A1Y2GA04
Uncharacterized protein.
    
 
 0.593
A0A1Y2H175
Uncharacterized protein.
      
 0.515
A0A1Y2GS94
J domain-containing protein.
  
 
 0.504
A0A1Y2GLH5
Pre-mRNA splicing factor Syf-1.
   
 
 0.480
A0A1Y2H287
Isy1-like splicing factor.
   
   0.467
A0A1Y2H323
Pre-mRNA-splicing factor Cwf15/Cwc15.
    
   0.465
A0A1Y2GCL9
Heat shock protein Hsp70-9; Belongs to the heat shock protein 70 family.
  
 
 
 0.432
A0A1Y2GBN9
Heat shock protein 70 family; Belongs to the heat shock protein 70 family.
  
 
 
 0.429
A0A1Y2GLI0
Dynamitin-domain-containing protein.
    
 
 0.428
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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