STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GBH7Oligosaccharide biosynthesis protein Alg14 like-domain-containing protein. (344 aa)    
Predicted Functional Partners:
ALG13
UDP-N-acetylglucosamine transferase subunit ALG13; Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.
   
 0.997
A0A1Y2GTC9
Glycosyl transferase family 4-domain-containing protein.
    
 0.912
A0A1Y2G8L2
Uncharacterized protein.
   
 
 0.867
A0A1Y2GKV7
Uncharacterized protein.
     
 0.748
A0A1Y2G6D2
Uncharacterized protein.
     
 0.715
A0A1Y2H1Z5
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
   
 
 0.680
A0A1Y2GSG0
Nucleotide-diphospho-sugar transferase.
   
 
 0.632
A0A1Y2GLL1
Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit.
     
 0.578
A0A1Y2GMZ1
Uncharacterized protein.
     
 0.578
A0A1Y2GWG6
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
     
 0.578
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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