STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GCM7Uncharacterized protein. (159 aa)    
Predicted Functional Partners:
A0A1Y2GNV2
ETC complex I subunit conserved region-domain-containing protein.
   
 
 0.898
A0A1Y2GU96
ETC complex I subunit conserved region-domain-containing protein.
   
   0.890
A0A1Y2H4K9
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 
 0.862
A0A1Y2GA67
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.853
A0A1Y2GFP5
Uncharacterized protein.
  
 0.853
A0A1Y2GU27
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
   
 
 0.849
A0A1Y2H001
NADH dehydrogenase I, D subunit; Belongs to the complex I 49 kDa subunit family.
   
 
 0.835
A0A1Y2GPQ3
Thioredoxin-like [2Fe-2S] ferredoxin-domain-containing protein.
   
   0.819
A0A1Y2GA31
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 
 0.805
A0A1Y2H3N9
Uncharacterized protein.
   
   0.796
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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