STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GCW5Nuclear pore protein. (882 aa)    
Predicted Functional Partners:
A0A1Y2GHR0
Nucleoporin Nup186/Nup192/Nup205.
   
 0.999
A0A1Y2GSU7
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
   
 0.999
A0A1Y2GUL4
Nuclear protein 96-domain-containing protein.
   
 0.999
A0A1Y2GF51
RRM Nup35-type domain-containing protein.
   
 0.998
A0A1Y2H0Q1
Nucleoporin complex subunit 54-domain-containing protein.
   
 0.997
A0A1Y2G7V7
Nuclear pore glyco protein p62.
   
 0.996
A0A1Y2GL87
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.996
A0A1Y2GM60
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
   
 0.994
A0A1Y2GXV6
Nucleoporin subcomplex protein binding to Pom34-domain-containing protein.
   
 0.992
A0A1Y2GAR5
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
   
 0.991
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
Server load: low (20%) [HD]