STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GD66Thi4 family-domain-containing protein. (279 aa)    
Predicted Functional Partners:
A0A1Y2GG81
NMT1/THI5 like-domain-containing protein.
  
  
 0.857
A0A1Y2GE37
Phosphomethylpyrimidine kinase-domain-containing protein.
  
  
 0.804
A0A1Y2G9V4
Uncharacterized protein.
  
  
 0.800
A0A1Y2GBA2
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.
 
      0.746
A0A1Y2GSB1
Adenosine kinase.
     
 0.702
A0A1Y2GT69
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
     
 0.695
A0A1Y2GLC0
5-amino-6-uracil reductase.
     
 0.676
A0A1Y2GTS6
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
     
 0.547
A0A1Y2GCV4
TMP-TENI-domain-containing protein.
   
  
 0.527
A0A1Y2GWR2
NUDIX hydrolase domain-like protein.
      
 0.468
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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