STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GD67SET domain-containing protein. (115 aa)    
Predicted Functional Partners:
A0A1Y2GQM7
Cytidine deaminase-like protein.
   
 0.964
A0A1Y2GQX8
Cytidine deaminase-like protein.
   
 0.935
A0A1Y2GG24
DUF1768 domain-containing protein.
   
 0.905
A0A1Y2H3I1
Uncharacterized protein.
   
 0.905
A0A1Y2GUS0
Dihydrofolate reductase-like domain-containing protein; Belongs to the dihydrofolate reductase family.
  
 
 0.844
A0A1Y2H3I5
Thymidylate synthase.
  
 
 0.753
A0A1Y2G7R6
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
  0.697
A0A1Y2GN55
Deoxythymidylate kinase, isoform CRA_b.
    
 0.682
A0A1Y2GLF5
Metallo-dependent phosphatase-like protein; Belongs to the 5'-nucleotidase family.
    
 0.681
A0A1Y2GUU0
Metallo-dependent phosphatase-like protein.
    
 0.681
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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