STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GD80YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein. (220 aa)    
Predicted Functional Partners:
A0A1Y2H4J0
S5A_REDUCTASE domain-containing protein.
     
 0.848
A0A1Y2GBC9
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
   
 
 0.783
A0A1Y2GJ40
Uncharacterized protein.
   
 
 0.768
A0A1Y2G787
Uncharacterized protein.
     
 0.669
A0A1Y2GB96
Sterol 3-beta-glucosyltransferase; Belongs to the glycosyltransferase 28 family.
     
 0.669
A0A1Y2GS45
Sterol 3-beta-glucosyltransferase; Belongs to the glycosyltransferase 28 family.
     
 0.669
A0A1Y2G9M3
Cytochrome P450.
     
 0.654
A0A1Y2GD20
Ras association (RalGDS/AF-6) domain-domain-containing protein.
     
 0.654
A0A1Y2GQX0
Uncharacterized protein.
     
 0.654
A0A1Y2GCD8
Cytochrome P450 51; Belongs to the cytochrome P450 family.
     
 0.623
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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