STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GDL7GDP-D-mannose 4,6-dehydratase. (365 aa)    
Predicted Functional Partners:
A0A1Y2G840
GDP-keto-6-deoxymannnose 3,5-epimerase/4-reductase.
 0.947
A0A1Y2GMY7
NAD(P)-bd_dom domain-containing protein.
  
0.845
A0A1Y2G8V4
Mannose-1-phosphate guanyltransferase.
    
 0.798
A0A1Y2H1Z5
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
  
 
 0.796
A0A1Y2G8L2
Uncharacterized protein.
  
 
 0.789
A0A1Y2GTM9
Nucleotide-diphospho-sugar transferase.
    
 0.788
A0A1Y2GDU3
Epimerase domain-containing protein.
  
 0.770
A0A1Y2GH45
L-threonine 3-dehydrogenase mitochondrial.
  
 0.770
A0A1Y2GJW2
Epimerase domain-containing protein.
  
 0.770
A0A1Y2GNL6
RmlD_sub_bind domain-containing protein.
  
 0.770
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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