STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GED9Mannosyltransferase putative-domain-containing protein. (415 aa)    
Predicted Functional Partners:
A0A1Y2GUQ5
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase.
  
 
 0.693
A0A1Y2GBC9
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
    
 0.561
A0A1Y2GLC1
Uncharacterized protein.
     
 0.539
A0A1Y2H1Q7
Acyl-CoA dehydrogenase/oxidase.
     
 0.418
A0A1Y2G942
Short chain dehydrogenase.
     
 0.413
A0A1Y2GRI3
SCP2 sterol-binding domain-containing protein.
     
 0.413
A0A1Y2G6F7
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
     
 0.412
A0A1Y2G7J1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
     
 0.412
A0A1Y2G836
Acyl-CoA dehydrogenase/oxidase.
     
 0.412
A0A1Y2GAX6
Uncharacterized protein.
     
 0.412
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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