STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GEP1tRNA-binding domain-containing protein. (225 aa)    
Predicted Functional Partners:
A0A1Y2GN10
tRNA synthetases class I (M)-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.999
A0A1Y2GW24
tRNA synthetases class I, catalytic domain-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.990
A0A1Y2H094
Leucine-tRNA ligase.
  
 0.989
A0A1Y2GXT8
tRNA synthetases class I (M)-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.988
A0A1Y2GDX7
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.983
A0A1Y2GV58
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.982
A0A1Y2GYH5
Prolyl-tRNA synthetase.
  
 0.981
A0A1Y2GMB7
tRNA synthetases class I, catalytic domain-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.975
A0A1Y2GBA1
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.971
A0A1Y2GB67
Tyrosine--tRNA ligase.
  
0.959
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.