STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GEU7WD40-repeat-containing domain protein. (774 aa)    
Predicted Functional Partners:
A0A1Y2H428
Cullin; Belongs to the cullin family.
    
 0.940
A0A1Y2G8K5
S-phase kinase-associated protein 1A-like protein; Belongs to the SKP1 family.
    
 0.906
A0A1Y2GKV0
S-phase kinase-associated protein 1A-like protein; Belongs to the SKP1 family.
    
 0.906
A0A1Y2GM10
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.906
A0A1Y2H210
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.906
A0A1Y2GH41
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.905
A0A1Y2G8W8
RING-box protein 1.
    
 0.887
A0A1Y2GFY5
Translation protein SH3-like domain-containing protein.
    
 0.850
A0A1Y2G9Q9
60S ribosomal protein L2.
    
  0.810
A0A1Y2GHM4
Cell division control protein; Belongs to the CDC6/cdc18 family.
    
 0.791
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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