STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GGK1Uncharacterized protein. (861 aa)    
Predicted Functional Partners:
A0A1Y2GUM1
Uncharacterized protein.
    
 0.750
A0A1Y2GLY9
Uncharacterized protein; Belongs to the complex I LYR family.
    
 
 0.713
A0A1Y2GJI6
Uncharacterized protein.
   
   0.691
A0A1Y2GUW7
Small GTP-binding protein.
   
   0.691
A0A1Y2G917
Mre11 DNA-binding presumed domain-domain-containing protein; Belongs to the MRE11/RAD32 family.
   
   0.685
A0A1Y2GA67
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.581
A0A1Y2GFP5
Uncharacterized protein.
    
   0.581
A0A1Y2GEC4
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 
 0.573
A0A1Y2GJD3
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 
 0.573
A0A1Y2G7Z7
Putative tyrosine phosphatase family protein.
    
   0.554
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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