STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GH82U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family. (327 aa)    
Predicted Functional Partners:
A0A1Y2GXY3
Bicoid-interacting protein 3-domain-containing protein.
    
 
 0.733
A0A1Y2GSR3
WD40-repeat-containing domain protein.
   
  
 0.625
A0A1Y2GRT6
MT-A70-domain-containing protein; Belongs to the MT-A70-like family.
   
  
 0.587
A0A1Y2GKU6
MT-A70-domain-containing protein; Belongs to the MT-A70-like family.
   
  
 0.549
A0A1Y2GUG7
S-adenosyl-L-methionine-dependent methyltransferase.
      
 0.479
A0A1Y2GET5
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
      
 0.461
A0A1Y2GT17
Tetrapyrrole methylase; Belongs to the precorrin methyltransferase family.
 
      0.460
A0A1Y2GK21
MT-A70-domain-containing protein; Belongs to the MT-A70-like family.
      
 0.455
A0A1Y2GC28
DExH-box splicing factor binding site-domain-containing protein.
      
 0.441
A0A1Y2GVW7
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
  
 0.440
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.