STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GH97CPSase_sm_chain domain-containing protein. (68 aa)    
Predicted Functional Partners:
A0A1Y2GVU9
Aspartate/glutamate/uridylate kinase; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
 
 0.956
A0A1Y2GKY8
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.948
A0A1Y2GEX6
Allantoinase.
  
 0.947
A0A1Y2GZW9
Argininosuccinate synthase.
  
 
 0.941
A0A1Y2H073
Amidophosphoribosyltransferase.
  
 
 0.929
A0A1Y2G7E5
Dihydroorotase, homodimeric type.
   
 
 0.921
A0A1Y2H7N2
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 0.920
A0A1Y2G7X3
Small subunit of carbamoyl-phosphate synthase.
   
 0.900
A0A1Y2GFE6
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 
 0.862
A0A1Y2GBL0
Argininosuccinate lyase.
  
 
 0.844
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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