STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GIY3Amidohydro-rel domain-containing protein. (936 aa)    
Predicted Functional Partners:
A0A1Y2GBE6
Cytochrome b5-like heme/steroid binding domain-containing protein; Belongs to the cytochrome b5 family.
    
  0.600
A0A1Y2GUS0
Dihydrofolate reductase-like domain-containing protein; Belongs to the dihydrofolate reductase family.
    
 0.546
A0A1Y2H151
Isocitrate lyase.
   
 0.516
A0A1Y2H3I5
Thymidylate synthase.
     
 0.511
A0A1Y2GKZ7
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.507
A0A1Y2GQE4
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.507
A0A1Y2GS37
Peptidase family S49-domain-containing protein.
    
 0.507
A0A1Y2GIV4
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
     
 0.482
A0A1Y2GPR9
Suf domain-containing protein.
     
 0.482
A0A1Y2G8E1
Flavodoxin-like domain-containing protein.
     
 0.470
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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