STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GJ11Uncharacterized protein. (378 aa)    
Predicted Functional Partners:
A0A1Y2G7K6
t-SNARE coiled-coil homology domain-containing protein.
    
0.862
A0A1Y2H4N0
Synaptobrevin-like protein ykt6; Belongs to the synaptobrevin family.
     
 0.774
A0A1Y2GIM9
t-SNARE.
     
 0.752
A0A1Y2GDV3
t-SNARE; Belongs to the syntaxin family.
     
 0.682
A0A1Y2GRF7
t-SNARE.
     
 0.682
A0A1Y2H1P0
Phox homologous domain-containing protein.
     
 0.657
A0A1Y2GVX9
Uncharacterized protein.
     
 0.620
A0A1Y2GXQ5
Sec20-domain-containing protein.
     
 0.612
A0A1Y2GCE9
TIP-1 family-domain-containing protein.
   
 
  0.609
A0A1Y2G9J1
ARF-like protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.585
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.