STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GJ99Ras-GEF domain-containing protein. (1112 aa)    
Predicted Functional Partners:
A0A1Y2GUM1
Uncharacterized protein.
    
 0.828
A0A1Y2H083
Vaculolar membrane protein-domain-containing protein.
    
 0.686
A0A1Y2GSI3
Fip1 domain-containing protein.
    
 0.682
A0A1Y2GJV8
Small GTPase.
    
 0.665
A0A1Y2GFH0
Uncharacterized protein.
    
  0.640
A0A1Y2GIZ5
Uncharacterized protein.
     
 0.629
A0A1Y2GNM2
PH domain-containing protein.
    
  0.605
A0A1Y2GSC4
Uncharacterized protein.
    
  0.605
A0A1Y2G8B2
Uncharacterized protein.
    
 0.562
A0A1Y2G8T1
Small GTPase superfamily.
    
 0.562
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.