STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GJU2DNA_mis_repair domain-containing protein. (803 aa)    
Predicted Functional Partners:
A0A1Y2GTR8
Uncharacterized protein.
  
 
0.999
A0A1Y2GRJ7
Uncharacterized protein.
  
 
0.996
A0A1Y2GU67
DNA mismatch repair protein MSH2; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.993
A0A1Y2GG18
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.990
A0A1Y2GW08
PIN domain-like protein.
   
 0.982
A0A1Y2GLD1
Muts domain V-domain-containing protein.
 
 0.981
A0A1Y2GM85
Helicase C-terminal domain-domain-containing protein.
   
 0.977
A0A1Y2H2K5
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.973
A0A1Y2GSD2
Uncharacterized protein.
  
 0.967
A0A1Y2H3W4
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
    
 0.962
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.