STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GJY0NAD(P)-bd_dom domain-containing protein. (475 aa)    
Predicted Functional Partners:
A0A1Y2GUS0
Dihydrofolate reductase-like domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.808
A0A1Y2GUM1
Uncharacterized protein.
    
 0.749
A0A1Y2H003
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.747
A0A1Y2GTP1
Acyl transferase/acyl hydrolase/lysophospholipase.
  
 0.738
A0A1Y2H3N9
Uncharacterized protein.
    
 0.691
A0A1Y2GRX8
Kinase-like domain-containing protein.
    
 0.677
A0A1Y2GUQ5
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase.
    
 0.673
A0A1Y2GAA5
TPR_REGION domain-containing protein.
    
 0.644
A0A1Y2GUV0
TPR_REGION domain-containing protein.
    
 0.644
A0A1Y2H011
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
  0.641
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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