STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GKK2Exostosin family-domain-containing protein; Belongs to the glycosyltransferase 47 family. (468 aa)    
Predicted Functional Partners:
A0A1Y2H1V1
Ribosomal protein S5 domain 2-type protein.
     
 0.759
A0A1Y2GGZ5
Pyridoxal phosphate-dependent transferase.
     
 0.724
A0A1Y2GMZ6
Threonine dehydratase.
     
 0.629
A0A1Y2GZ45
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
     
 0.629
A0A1Y2GH45
L-threonine 3-dehydrogenase mitochondrial.
     
 0.536
A0A1Y2G687
Pyridoxal phosphate-dependent transferase.
     
 0.529
A0A1Y2GAK6
Pyridoxal phosphate-dependent transferase.
     
 0.529
A0A1Y2GSH2
Pyridoxal phosphate-dependent transferase.
     
 0.529
A0A1Y2G9Q3
Glycosyl transferase family 21-domain-containing protein.
     
 0.524
A0A1Y2GZH8
Glycosyl transferase family 21-domain-containing protein.
     
 0.524
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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