STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GKS3Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (642 aa)    
Predicted Functional Partners:
A0A1Y2GER3
ClpP/crotonase-like domain-containing protein.
  
 0.934
A0A1Y2GKW4
Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.914
A0A1Y2GWV4
SCP2 sterol-binding domain-containing protein.
   
 0.914
A0A1Y2H0K3
SCP2 sterol-binding domain-containing protein.
   
 0.914
A0A1Y2H1L5
ClpP/crotonase-like domain-containing protein.
   
 0.911
A0A1Y2GHE6
ClpP/crotonase-like domain-containing protein; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.909
A0A1Y2G942
Short chain dehydrogenase.
  
 0.903
A0A1Y2GRI3
SCP2 sterol-binding domain-containing protein.
  
 0.903
A0A1Y2GI25
Peroxisomal multifunctional enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.896
A0A1Y2G9V1
ETF domain-containing protein.
  
 0.893
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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