STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GL91Cyclin N-terminal domain-containing protein. (250 aa)    
Predicted Functional Partners:
A0A1Y2GD15
Uncharacterized protein.
    
 0.944
A0A1Y2GLG5
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
    
 0.894
A0A1Y2GTG5
SPOC like C-terminal domain-containing protein.
    
 0.772
A0A1Y2GK53
Putative ATP-dependent DNA ligase.
    
 0.766
A0A1Y2GRY7
DNA ligase.
    
 0.766
A0A1Y2GI66
DNA ligase.
    
 0.711
A0A1Y2G6A3
Cyclin-dependent kinase 3-like protein; Belongs to the protein kinase superfamily.
    
 0.634
A0A1Y2GBQ7
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.634
A0A1Y2GCK2
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.634
A0A1Y2GDL2
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
     
 0.626
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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