STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GLJ5Mitochondrial carrier domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (393 aa)    
Predicted Functional Partners:
A0A1Y2GEE5
Putative 40S ribosomal protein RPS3.
   
   0.642
A0A1Y2G9Q9
60S ribosomal protein L2.
   
 
 0.634
A0A1Y2GQV3
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.619
A0A1Y2H513
60S ribosomal protein L21-A.
   
   0.613
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
   0.609
A0A1Y2H6T0
60S ribosomal protein L5-2.
   
   0.609
A0A1Y2GGU0
Ribosomal protein L35A.
   
   0.608
A0A1Y2H5Q0
Ribosomal protein L4 domain-containing protein.
   
   0.607
A0A1Y2GEU1
Ribosomal protein L6, alpha-beta domain-containing protein.
   
   0.605
A0A1Y2G6Z5
Putative 60S ribosomal protein L22.
   
   0.601
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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