STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GM66Guanine nucleotide binding protein, alpha subunit. (316 aa)    
Predicted Functional Partners:
A0A1Y2GFH1
WD40-repeat-containing domain protein.
   
 0.923
A0A1Y2GMQ8
WD40-repeat-containing domain protein.
   
 0.923
A0A1Y2GFN4
Ubiquitin carboxyl-terminal hydrolase.
    
 0.895
A0A1Y2G723
Uncharacterized protein.
   
 0.892
A0A1Y2GY98
Regulator of G protein signaling domain-domain-containing protein.
   
 0.892
A0A1Y2GWB4
RGS domain-containing protein.
   
 0.890
A0A1Y2GUM1
Uncharacterized protein.
    
 0.866
A0A1Y2GQI2
RGS domain-containing protein.
   
 0.846
A0A1Y2GE21
Uncharacterized protein.
   
 0.820
A0A1Y2H0G7
Uncharacterized protein.
   
 0.820
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.