STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GM70PLC-like phosphodiesterase. (327 aa)    
Predicted Functional Partners:
A0A1Y2G6H6
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
 
  
   0.876
A0A1Y2GLG5
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
     
 0.851
A0A1Y2G945
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.847
A0A1Y2G9N9
CDP-alcohol phosphatidyltransferase-domain-containing protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.838
A0A1Y2GNB6
HAD-like domain-containing protein.
   
 0.838
A0A1Y2GPG0
HAD hydrolase.
   
 0.838
A0A1Y2GD15
Uncharacterized protein.
   
 
 0.818
A0A1Y2GS20
Lysophospholipase NTE1; Intracellular phospholipase B that catalyzes the double deacylation of phosphatidylcholine (PC) to glycerophosphocholine (GroPCho). Plays an important role in membrane lipid homeostasis.
  
 
 0.812
A0A1Y2GUM1
Uncharacterized protein.
    
 0.788
A0A1Y2GTH9
PlsC domain-containing protein.
  
 
 0.785
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.