STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GMW8Proteasome subunit beta; Belongs to the peptidase T1B family. (274 aa)    
Predicted Functional Partners:
A0A1Y2G6H2
Proteasome subunit alpha type.
   
 0.999
A0A1Y2G7F0
Proteasome subunit beta.
   
0.999
A0A1Y2G7X4
Proteasome subunit alpha type.
   
 0.999
A0A1Y2G9L4
26S proteasome subunit P45; Belongs to the AAA ATPase family.
   
 0.999
A0A1Y2GE71
Putative 26S proteasome regulatory particle subunit Rpn8.
   
 0.999
A0A1Y2GGH1
Proteasome subunit alpha type.
   
 0.999
A0A1Y2GGI2
Proteasome subunit alpha type.
   
 0.999
A0A1Y2GHV1
26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.
   
 0.999
A0A1Y2GJZ8
Proteasome subunit beta.
   
 0.999
A0A1Y2GK93
Proteasome subunit alpha type.
   
 0.999
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.