STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GN47P-loop containing nucleoside triphosphate hydrolase protein. (1632 aa)    
Predicted Functional Partners:
A0A1Y2GLE7
Uncharacterized protein.
   
 0.994
A0A1Y2H0B4
Putative intracellular protein transport-related protein; Belongs to the adaptor complexes medium subunit family.
    
 0.918
A0A1Y2GUM1
Uncharacterized protein.
    
 0.910
A0A1Y2GTZ3
Utp14 protein-domain-containing protein.
   
 0.900
A0A1Y2GBJ9
Uncharacterized protein.
    
  0.899
A0A1Y2GC65
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.887
A0A1Y2GMY4
WD40-repeat-containing domain protein.
   
 0.885
A0A1Y2GFT1
WD40-repeat-containing domain protein.
    
 0.884
A0A1Y2GPN5
WD40-repeat-containing domain protein.
   
 0.882
A0A1Y2GW53
CBF/Mak21 family-domain-containing protein.
   
  0.882
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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