STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GP67Malignant T cell amplified sequence 1, isoform CRA_b. (139 aa)    
Predicted Functional Partners:
A0A1Y2GTP2
Translation machinery-associated protein 22.
   
 
 0.990
A0A1Y2GQH0
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
 
 
    0.904
A0A1Y2GYI9
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
 
 
    0.903
A0A1Y2G9P7
Translation factor sui1.
   
 
 0.888
A0A1Y2GFD0
Translation factor sui1.
   
 
 0.888
A0A1Y2GEE5
Putative 40S ribosomal protein RPS3.
    
   0.761
A0A1Y2GAH5
Queuosine salvage protein; Involved in salvaging queuosine.
 
      0.755
A0A1Y2G8T2
40S ribosomal protein S20.
   
   0.752
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
   0.745
A0A1Y2GUV6
Ribosomal protein S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
   0.741
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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