STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GPL3PapD-like protein. (404 aa)    
Predicted Functional Partners:
A0A1Y2GQR0
Oxysterol-binding protein-domain-containing protein; Belongs to the OSBP family.
    
 0.899
A0A1Y2GAB0
START domain-containing protein.
    
 0.883
A0A1Y2GDI4
Oxysterol-binding protein-domain-containing protein.
    
 0.810
A0A1Y2GNI7
B-cell receptor-associated protein 31-like-domain-containing protein.
   
 0.753
A0A1Y2GW44
B-cell receptor-associated protein 31-like-domain-containing protein.
   
 0.753
A0A1Y2H2M6
Synaptobrevin.
    
 0.708
A0A1Y2GV46
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
    
 0.700
A0A1Y2GAK9
t-SNARE.
    
 0.684
A0A1Y2GM88
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 0.684
A0A1Y2GNR5
SNARE domain-containing protein.
    
 0.684
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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