STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GPM5SET domain-containing protein. (1676 aa)    
Predicted Functional Partners:
A0A1Y2GXW5
SANT domain-containing protein.
   
 
 0.938
A0A1Y2GKN0
WD40-repeat-containing domain protein.
    
 
 0.936
A0A1Y2G9C1
Uncharacterized protein.
    
 0.920
A0A1Y2GXS4
Uncharacterized protein.
   
0.916
A0A1Y2G866
Uncharacterized protein.
   
0.907
A0A1Y2G6X1
Histone H3.
    
 0.874
A0A1Y2GLX3
Histone H3; Belongs to the histone H3 family.
    
 0.874
A0A1Y2H138
Uncharacterized protein.
    
 0.860
A0A1Y2GC19
Histone H2A; Belongs to the histone H2A family.
    
 0.855
A0A1Y2GM37
SET domain-containing protein.
    
0.845
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.